Papers

*denotes corresponding author   †denotes co-first authors 

From NCBS

1. M Sreepadmanabh, M. Ganesh, P. Sanjenbam, C. Kurzthaler, D. Agashe, T. Bhattacharjee*, Cell shape affects bacterial colony growth under physical confinement. Nature communications 2024

2. N. K. Babu, M Sreepadmanabh, S. Dutta*, T. Bhattacharjee*, Interplay of geometry and mechanics in epithelial wound healing. Physical Review E 2024  (Pre-print: bioRxiv)

3. M Sreepadmanabh †, Ashitha B. A. †, T. Bhattacharjee*, Design approaches for 3D cell culture and 3D bioprinting platforms. Biophysics Reviews 2024. 

4. L. Theeyancheri, S. Chaki, T. Bhattacharjee*, R. Chakrabarti*, Dynamic clustering of active rings. Physical Review Research 2024. 

5. L. Theeyancheri, S. Chaki, T. Bhattacharjee*, R. Chakrabarti*, Active dynamics of linear chains and rings in porous media. The Journal of Chemical Physics 2023. 

6. M Sreepadmanabh, M. Ganesh, R. Bhat, T. Bhattacharjee*, Jammed microgel growth medium prepared by flash-solidification of agarose for 3D cell culture and 3D bioprinting. Biomedical Materials 2023 (Pre-print: bioRxiv)

7. S. Duraivel†, V. Subramaniam†, S. Chisolm, G. M. Scheutz, B. Sumerlin, T. Bhattacharjee,  T. E. Angelini, Leveraging Liquid-Liquid Phase Separation in Embedded 3D Bioprinting. Biophysics Reviews 2022

8. L. Theeyancheri, S. Chaki, T. Bhattacharjee*, R. Chakrabarti*, Migration of active rings in porous media. Physical Review E 2022. Pre-print: arXiv.

Before NCBS

9. Y. M. Psarellis, S. Lee, T. Bhattacharjee, S. S. Datta, J. M. Bello-Rivas, I. G. Kevrekidis, Data-driven Discovery of Chemotactic Migration of Bacteria via Machine Learning. BMC Bioinformatics 2024.

10. J. Muse, M. Hughes, C. D. Crane, T. E. Angelini, K. D. Schulze, T. Bhattacharjee, W. G. Sawyer, C. Taylor. Valve incorporating temporary phase change material. US Patent 11,964,422, 2024.

11. T. E. Angelini, B. S. Sumerlin, C. S. O'bryan, W. G. Sawyer, T. Bhattacharjee, Organic microgel system with di—and tri-block blends of herschel-bulkley fluid for 3D printing of sacrificial support structures US Patent 11,753,538, 2024.

12. S. S. Datta, T. Bhattacharjee,  Bacteria in 3d porous media. Indian Patent 463649

13. A. Martínez-Calvo†, T. Bhattacharjee†, R. K. Bay, H. N. Luu, A. M Hancock, N. S Wingreen, S. S Datta, Morphological instability and roughening of growing 3D bacterial colonies. PNAS 2022 Pre-print: biorXiv.

14.  W. G. Sawyer, T. E. Angelini, S. C. Ghivizzani, T. Bhattacharjee, G. D. Palmer. Growth media for three-dimensional cell culture, US Patent 11,390,835

15. J. A. Ott, S. Chiu, D. B. Amchin, T. Bhattacharjee, S. S. Datta, A biophysical threshold for biofilm formation. e-Life 2022. Pre-print: arXiv

16. D. B. Amchin, J. A. Ott, T. Bhattacharjee, S. S. Datta, Influence of confinement on the spreading of bacterial populations. PLOS Computational Biology 2022. Pre-print: arXiv.

17. T. Bhattacharjee†, D. B. Amchin† ; R. Alert† ; J. A. Ott; S. S. Datta, Chemotactic smoothing of collective migration. e-Life 2022. Pre-print: arXiv.

18. C. Kurzthaler†, S. Mandal†, T. Bhattacharjee, H. Lowen, S. S. Datta, H. A. Stone. A geometric criterion for the optimal spreading of active polymers in porous media.  Nature communications, 2021.

19. T. E. Angelini, W. G. Sawyer, K. G. Rowe, T. Bhattacharjee, A. Fernandez-Nieves, Y. Chang, S. M. Marquez. High speed 3D printing system for wound and tissue replacement. US Patent 11,007,705 2021.

20. T. Bhattacharjee†, D. B. Amchin† , J. A. Ott, F. Kratz, S. S. Datta. Chemotactic Migration of Bacteria in Porous Media. Biophysical Journal 2021.

21. L. J. Perez, T. Bhattacharjee, S. S. Datta, R. Parashar, N. L. Sund. Impact of confined geometries on hopping and trapping of motile bacteria in porous media. Physical Review E 2021, 103, 012611.

22. T. Bhattacharjee; S. S. Datta. Confinement and activity regulate bacterial motion in porous media. Soft Matter 2019.

23. C. Morley†, S. Ellison†, T. Bhattacharjee, K. Schulze, C. O’Bryan, K. Smith, C. Kabb, S. Niemi, G. Moore, C. Flores, D. Tran, B. Sumerlin, W. Sawyer, D. Mitchell, and T. E. Angelini. Quantitative characterization of 3D bioprinted structural elements under cell generated forces. Nature communications 2019, 10, 3029.

24. T. Bhattacharjee; S. S. Datta. Bacterial hopping and trapping in porous media. Nature Communications 2019. 

25. C. S. O’Bryan, T. Bhattacharjee, S. L. Marshall, W. G. Sawyer, and T. E. Angelini. . Commercially available microgels for 3D bioprinting. Bioprinting 2018, 11, e00037.

26. T. Bhattacharjee and, T. E. Angelini. 3D T cell motility in jammed microgels. Journal of Physics D: Applied Physics 2018. 

27. E. O. McGhee, A. A. Pitenis, J. M. Urueña, K. D. Schulze, A. J. McGhee, C. S. O’Bryan, T. Bhattacharjee, T. E. Angelini, and W. G. Sawyer. In Situ Measurements of Contact Dynamics in Speed-dependent Hydrogel Friction. Biotribology 2018, 13, 23-29.

28. T. Bhattacharjee, C. P. Kabb, C. S. O’Bryan, J. M. Urueña, B. S. Sumerlin, W. G. Sawyer, and T. E. Angelini.. Polyelectrolyte scaling laws for microgel yielding near jamming. Soft Matter 2018. 

29. C. S. O’Bryan, T. Bhattacharjee, S. R. Niemi, S. Balachandar, N. Baldwin, S. V. Ellison, C. Taylor, W. G. Sawyer, and T. E. Angelini. Three-dimensional printing with sacrificial materials for soft matter manufacturing. MRS bulletin 2017, 42, 571-577.

30. D. M. Garcia, K. D. Schulze, C. S. O’Bryan, T. Bhattacharjee, W. G. Sawyer, and T. E. Angelini. Eliminating the surface location from soft matter contact mechanics measurements. Tribology-Materials, Surfaces & Interfaces 2017, 11, 187-192.

31. A. A. Pitenis, J. M. Urueña, T. Hormel, T. Bhattacharjee, S. L.Marshall, S. M. Hart, K. D. Schulze, T. E. Angelini, and W. G. Sawyer. Corneal cell friction: survival, lubricity, tear films, and mucin production over extended duration in vitro studies. Biotribology 2017, 11, 77-83.

32. T. T. Hormel, T. Bhattacharjee, A. A. Pitenis, J. M. Urueña, W. G. Sawyer, and T. E. Angelini. A confocal fluorescence microscopy method for measuring mucous layer growth on living corneal epithelia. Biotribology 2017, 11, 73-76.

33. K. D. Schulze, S. M. Zehnder, J. M. Urueña, T. Bhattacharjee, W. G. Sawyer, and T. E. Angelini. Elastic modulus and hydraulic permeability of MDCK monolayers. Journal of Biomechanics 2017, 53, 210-213.

34. C. S. O’Bryan, T. Bhattacharjee, S. Hart, C. P. Kabb, K. D. Schulze, I. R. Chilakala, B. S. Sumerlin, W. G. Sawyer, and T. E. Angelini. Self-assembled micro-organogels for 3D printing silicone structures. Science Advances 2017, 3 e1602800.

35. A. A. Pitenis, J. M. Urueña, R. M. Nixon, T. Bhattacharjee, B. A. Krick, A. C. Dunn, T. E. Angelini, and W. G. Sawyer. Lubricity from Entangled Polymer Networks on Hydrogels. Journal of Tribology 2016, 138, 042102.

36. Y. Jin, A. Compaan, T. Bhattacharjee and Y. Huang. Granular gel support-enabled extrusion of three-dimensional alginate and cellular structures. Biofabrication 2016, 8 025016.

37. T. Bhattacharjee, C. J. Gil, S. L. Marshall, J. M. Urueña, C. S. O'Bryan, M. Carstens, B. Keselowsky, G. Palmer, S. Ghivizzani, P. Gibbs, W. G. Sawyer, and T. E. Angelini. Liquid-like solids support cells in 3D. ACS Biomaterials Science and Engineering 2016, 2 1787-1795. 

38. T. Bhattacharjee, S. M. Zehnder, K. G. Rowe, S. Jain, R. M. Nixon, W. G. Sawyer, and T. E. Angelini. Writing in the granular gel media. Science Advances 2015, e1500655, 1-6.